Dear DR. David Case,
Thanks for the reply..
I downdloaded the file called bugfix(1).all and added to amber10 directory.. (i alreday have a file named bugfix.at.all containing bugfixes 1to7)..i am thinking to rename the file bugfix(1).all as bugfix.all...and to run the command as:
patch -p0 -N -r patch_rejects <bugfix.all ....(or with the name bugfix(1).all as patch -p0 -N -r patch_rejects <bugfix.all)...
if i need to do only bugfix21 then....should i copy the whole file to
amber10/src/mm_pbsa/molsurf.c and run as:
patch -p0 <bugfix.21?
________________________________
From: David A. Case <case.biomaps.rutgers.edu>
To: AMBER Mailing List <amber.ambermd.org>
Sent: Tuesday, 2 June, 2009 7:35:09 PM
Subject: Re: [AMBER] Error in MM PBSA
On Tue, Jun 02, 2009, Vikas Sharma wrote:
> molsurf: molsurf.c:1055: is_buried: Assertion
> `sarg1 >= 0.0' failed.
See
http://archive.ambermd.org/200811/0296.html
(You could get this by searchig for "is_buried" at the Amber mailing list
archive.) This is also now posted as bugfix.21 at
http://ambermd.org.
...dac
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Received on Wed Jun 03 2009 - 01:15:12 PDT
