Hello everyone,
Since AMBER may not be suitable for molecular dynamics of protein in lipide membrane, I want to know if we can use GROMACS or NAMD for MD, and then use MM-PBSA to culculate binding energy
Thanks very much
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Pang Xueqin
State Key Laboratory of Molecular Reaction Dynamics
Dalian Institute of Chemical Physics
Chinese Academy of Sciences.
Tel: +86-411-84379352 Fax: +86-411-84675584
http://www.english.dicp.ac.cn/
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Received on Mon Jun 01 2009 - 01:08:28 PDT
