Dear Lin,
I assumed that your map is the secondary structure of proteins.
If so, the package DSSP can do it. you can obtain it at
http://swift.cmbi.kun.nl/gv/dssp/. Hope help.
>Dear all:
>
>I'm new on the subject. I've already use the command secstruct in ptraj and get the secstruct.out and secstruct.out.sum. I assumed that secstruct.out can be used to plot the map as attached, but which kind of software can be used to plot the map and how to operate?
>
>Best regards
>Lin
>
>
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Best regards,
2009-4-9
=========================================
Dechang Li, Ph.D Candidate
Department of Engineering Mechanics
Tsinghua University
Beijing 100084
P.R. China
Tel: +86-10-62773574(O)
Email: lidc02 at mails.tsinghua.edu.cn
=========================================
Received on Fri Apr 10 2009 - 01:14:00 PDT
