Thank you for your suggestion!
I tried that: I run both scripts (Run.amoeba and Run.amoeba_sol), and used the respective created files
in sander. It works for Run.amoeba but not Run.amoeba_sol.
For the Run.amoeba_sol, using the created hpv files it gives that error:
etRegFromUnwindContext: Can't get Gr0 from UnwindContext, using 0
forrtl: severe (64): input conversion error, unit 8, file /users/msrgah/amber10/test/sleap/amoeba/test_hpv.prmtop
Image PC Routine Line Source
sander 4000000001132030 Unknown Unknown Unknown
sander 400000000112D010 Unknown Unknown Unknown
sander 40000000010B3550 Unknown Unknown Unknown
sander 4000000001008AC0 Unknown Unknown Unknown
sander 4000000001007EC0 Unknown Unknown Unknown
sander 400000000104C160 Unknown Unknown Unknown
sander 40000000001F3F00 Unknown Unknown Unknown
sander 40000000001A53D0 Unknown Unknown Unknown
sander 40000000001A09F0 Unknown Unknown Unknown
sander 4000000000004590 Unknown Unknown Unknown
libc.so.6.1 2000000001A66970 Unknown Unknown Unknown
sander 40000000000043C0 Unknown Unknown Unknown
Thank you for the help,
Susana
Yes, what you describe is supposed to work, and the reason for your
failure needs to be tracked down.
As Wei suggested, try running Run.amoeba_sol, and using the hpv files it
creates in a sander run. Knowing whether or not that works should help
narrow down the source of your problems.
...thx...dac
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Received on Wed Apr 08 2009 - 01:20:32 PDT
