Re: [AMBER] Amber with AMOEBA force-field

From: David A. Case <case.biomaps.rutgers.edu>
Date: Mon, 6 Apr 2009 14:00:47 +0100

On Mon, Apr 06, 2009, Tomasio, Susana wrote:
>
> I am trying to run the example in amber10/test/sleap/amoeba, but I don't
> know how to create and solvate the box in sleap.
> (I mean the commands.. can't find it in the manual!)

The file Run.amoeba_sol shows how to solvate a protein using amoeba. If
that isn't helping, you need to give more detailed information about
exactly what you tried, and what happened.

....dac


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Received on Wed Apr 08 2009 - 01:08:52 PDT
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