Dear members,
I am trying to find the secondary structure of
residues in protein during MD simulation. So I have made my input file as
follows
> trajin mdcrd (my coordinate set)
> secstruct out x time 1 :4-7(for residue 4 to 7)
The results shows only 0 value for all residue (4-7) for all time period
during MD run.
I don't know if I am doing anything wrong. Please help me.
--
Nicholus Bhattacharjee
PhD Scholar
Department of Chemistry
University of Delhi
Delhi-110007 (INDIA)
Phone: 9873098743(M)
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Received on Wed Apr 08 2009 - 01:08:27 PDT
