try top2mol2.
Best
Junmei
On Tue, Mar 31, 2009 at 5:28 PM, Taufik Al-Sarraj <
taufik.alsarraj.utoronto.ca> wrote:
> Hi,
>
> Is the an ambmol2 function in amber? i would like to use
> ambpdb -p *.prmtop < *.rst> *.pdb
>
> but to create a mol2, unfortunately i cannot create a pdb file because i
> have some atoms named Si400 or H1400 which exceeds the number of digits
> allowed in pdb.
>
> alternatively, is there a way to load *.prmtop and *.rst files in x/t/sleap
> and use the savemol2 function?
>
> Best,
> Taufik
>
>
>
> _______________________________________________
> AMBER mailing list
> AMBER.ambermd.org
> http://lists.ambermd.org/mailman/listinfo/amber
>
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Wed Apr 01 2009 - 01:18:07 PDT
