Dear Amber experts,
I am test sander.MPI using amber9 in SGI cluster.
I tried the command below and I got the error output further blow.
I have no idea how to fix this matter.
Could anyone share your idea?
mpirun -stats cl1n001,cl1n002,cl1n003,cl1n004 8
/usr/local/amber9/exe/sander.MPI -O -i
/home/amberadm/Amber/polyAT_gb_init_min.in
-o /home/amberadm/Amber/polyAT.out -p /home/amberadm/Amber/polyAT_vac.prmtop
-c /home/amberadm/Amber/polyAT_vac.inpcrd -x
/home/amberadm/Amber/polyAT_gb_init_min.crd
-e /home/amberadm/Amber/polyAT_gb_init_min.en -inf
/home/amberadm/Amber/polyAT_gb_init_min_info.info
-r /home/amberadm/Amber/polyAT_gb_init_min.rst
Error: Unit 6 Error on OPEN: /home/amberadm/Amber/polyAT.out
That I need to manually create output file or just let the command do that?
Waiting for your reply.
Thank you.
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Received on Fri Feb 27 2009 - 01:11:47 PST
