Dear Alexander,
> I want to make a cysteine which has an S-link to a mannose. If I take
> CYM, protect the N and C-function and then set the S-atom to tail and
> connect this to 1MA I can't save my top and crd. I also tried to make
> the molecule with antechamber but again, I couldn't save the top and
> crd files. Does anybody has an idea or experience with this problem?
I think you could follow the strategy reported .
http://lists.q4md-forcefieldtools.org/wws/arc/q4md-fft/2009-01/msg00003.html
I would even vote for the second strategy, i. e. building a new Cys
residue as well...
regards, Francois
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Received on Wed Jan 28 2009 - 01:10:22 PST
