Hi everybody,
I am experiencing the following problem when trying to save the parameter file of my protein.
<saveamberparm> generates the following output:
Could not find bond parameter for: SH - SH
Building angle parameters.
Could not find angle parameter: HS - SH - SH
Could not find angle parameter: SH - SH - CT
etc.
I'm dealing with a small protein with 3 disulfide bonds.
I'm using leaprc.ff99SB as a forcefield
Any help in resolving this problem would be greatly appreciated
George
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Received on Sun Jan 25 2009 - 01:11:49 PST
