Re: [AMBER] ambpdb is changing atom names, a feature or bug?

From: David A. Case <case.biomaps.rutgers.edu>
Date: Fri, 9 Jan 2009 08:01:54 -0500

On Fri, Jan 09, 2009, Markus Kaukonen wrote:
>
> I issue (in Amber 10)
> ambpdb -pqr -p prmtop < prmcrd > test.pdb
>
> but the atom names are not the same in 'prmtop' file and in 'test.pdb'

Use the -aatm (Amber atom names) flag to ambpdb.

...dac


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Received on Sun Jan 11 2009 - 01:08:40 PST
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