On Fri, Jan 09, 2009, Markus Kaukonen wrote:
>
> I issue (in Amber 10)
> ambpdb -pqr -p prmtop < prmcrd > test.pdb
>
> but the atom names are not the same in 'prmtop' file and in 'test.pdb'
Use the -aatm (Amber atom names) flag to ambpdb.
...dac
_______________________________________________
AMBER mailing list
AMBER.ambermd.org
http://lists.ambermd.org/mailman/listinfo/amber
Received on Sun Jan 11 2009 - 01:08:40 PST