AMBER: High Bfactor values for the terminal residues/atoms

From: Siddharth Rastogi <>
Date: Mon, 13 Oct 2008 21:19:52 -0700

Dear ALL,
While calculating Bfactor values, I observe very large values for the end
terminal residues in particular.
This is the input I have given

trajin wtld.mdcrd.gz
center :1-n
image center familiar
rms first :1-n.CA
atomicfluct out wtld_bfactor_residue .CA byres bfactor

can anyone suggest me where I might have done wrong.
Siddharth Rastogi

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Received on Wed Oct 15 2008 - 05:09:13 PDT
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