Thanks Dave.
I used the -nobintraj flag and now after the make parallel step I get
the following error:
/lib/cpp -I/n2/rchaud/amber10/include -P -DSGI -DnoVDINVSQRT -DMPI
qm2_dftb_module.f > _qm2_dftb_module.f
/n2/rchaud/amber10/bin/mpif77 -c -n32 -mips4 -r14000 -O3
-LIST:notes=ON:software_names=ON
-LIST:all_options=ON:cite=ON:symbols=ON -freeform -o
qm2_dftb_module.o _qm2_dftb_module.f
/usr/lib32/cmplrs/be translates /tmp/ctmB.BAAa02vBo into
_qm2_dftb_module-after-lno.f and _qm2_dftb_module.loc, based on source
_qm2_dftb_module.f
### Compiler Error in file _qm2_dftb_module.f during Codegen Emit phase:
### Out of memory in MEM_POOL_Alloc
f90 INTERNAL ERROR: /usr/lib32/cmplrs/be returned non-zero status 1
/n2/rchaud/amber10/bin/mpif77: No such file or directory
*** Error code 1 (bu21)
*** Error code 1 (bu21)
the bin directory does have a file named mpif77.
any suggestions at this point?
thanks
On Wed, Oct 1, 2008 at 2:24 PM, David A. Case <case.biomaps.rutgers.edu> wrote:
> On Wed, Oct 01, 2008, Rima Chaudhuri wrote:
>>
>> I am trying to install the serial and the parallel version of Amber10
>> on a sgi_mips system.
>> When trying to install the serial version, I use:
>> ./configure_amber -static sgi_mips -verbose
>>
>> I get the following error message:
>>
>> Configuring netcdf; (may be time-consuming)
>> 617102:/usr/lib32/cmplrs/be: rld: Fatal Error: attempted access to
>> unresolvable symbol in /usr/lib32/cmplrs/whirl2f.so:
>> Host_To_Targ_Float_4
>> configure: error: Could not compile conftestf.f
>> netcdf configure returned 1
>> NETCDF configure failed! Check the netcdf_config.log file
>
> The (few?) remaining sgi_mips Amber people can chime in, but to start with,
> add the -nobintraj flag to your configure_amber line, and see what the next
> error is. Netcdf is not our code, and can be very hard to fix if it doesn't
> just "work".
>
> ...good luck...dac
>
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--
-Rima
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Received on Fri Oct 03 2008 - 05:08:32 PDT
