AMBER: Querry

From: dipti lele <>
Date: Tue, 26 Aug 2008 20:50:32 +0900

Hello all,

   I have two seperate peptides (to be precise one protein and another
peptide) i have to join them together at the C terminal end. How can I do
it? How can i do it using leap? i have given the BOND command but leap is
not able to find the bond parameters for C- N bond.
   What should I do in this regard. do I need to use some visualisation
software. I tried with Pymol but appending of the molecule I could not do.

Can you help me in this matter.

Thanks a lot

With regards,

Deepti Lele,
NII, New Delhi.
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Received on Wed Aug 27 2008 - 06:07:54 PDT
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