Hi!
I just installed amber 9.
I would like to use this new amber version to do constant pH simulation. I have succesfully generate parm and crd files following the instruction in the manual. But when I tried to run cpinutil.pl by the following command:
ambpdb -p prmtop < prmcrd | cpinutil.pl > cpin
I got the following error:
| New format PARM file being parsed.
| Version = 1.000 Date = 08/12/08 Time = 12:27:23
Can't locate CPin.pm in .INC (.INC contains: /usr/lib64/perl5/site_perl/5.8.8/x86_64-linux-thread-multi /usr/lib64/perl5/site_perl/5.8.7/x86_64-linux-thread-multi /usr/lib64/perl5/site_perl/5.8.6/x86_64-linux-thread-multi /usr/lib64/perl5/site_perl/5.8.5/x86_64-linux-thread-multi /usr/lib/perl5/site_perl/5.8.8 /usr/lib/perl5/site_perl/5.8.7 /usr/lib/perl5/site_perl/5.8.6 /usr/lib/perl5/site_perl/5.8.5 /usr/lib/perl5/site_perl /usr/lib64/perl5/vendor_perl/5.8.8/x86_64-linux-thread-multi /usr/lib64/perl5/vendor_perl/5.8.7/x86_64-linux-thread-multi /usr/lib64/perl5/vendor_perl/5.8.6/x86_64-linux-thread-multi /usr/lib64/perl5/vendor_perl/5.8.5/x86_64-linux-thread-multi /usr/lib/perl5/vendor_perl/5.8.8 /usr/lib/perl5/vendor_perl/5.8.7 /usr/lib/perl5/vendor_perl/5.8.6 /usr/lib/perl5/vendor_perl/5.8.5 /usr/lib/perl5/vendor_perl /usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi /usr/lib/perl5/5.8.8 . /usr/local/amber9/exe) at /usr/local/amber9/exe/cpinutil.pl
line 9.
BEGIN failed--compilation aborted at /usr/local/amber9/exe/cpinutil.pl line 9.
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Received on Sun Aug 17 2008 - 06:07:24 PDT
