Hi,
I am calculating PBCALC for a protein-protein and protein-small molecule
sets.
My inputs are fine for protein-protein. but it is not working for small
molecules.
 Calculating energy / entropy contributions
    Calc contrib for ../01_gensnap/wtmol_com.crd.1
        Calc MM/GB/SAS
        Generate PDB
        Center PDB
        Calc PBSA
        /usr/local/amber/exe/pbsa -O -i pbsa.in -o pbsa_com.1.out -c
../01_gensnap/wtmol_com.crd.1 -p ../wtmol.top not successful
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" (in the *body* of the email)
      to majordomo.scripps.edu
Received on Wed Aug 13 2008 - 06:07:18 PDT