AMBER: Hybrid REMD amber10

From: Geoff Wood <geoffrey.wood.epfl.ch>
Date: Mon, 19 May 2008 14:41:54 +0200

Dear Amber users,

In amber10 the hybrid remd calculations have become a lot more user-
friendly, which is great. However, in the manual it states "In
particular this means that
the correct GB radii must be specified in the fully solvated topology
file," I was wondering if anyone could elaborate on this?

Thanks in advance.

----------------------------------------------------------------------------------------------------------------------------------
Dr Geoffrey Wood
Ecole Polytechnique Fédérale de Lausanne http://lcbcpc21.epfl.ch/Group_members/geoff/
SB - ISIC - LCBC
BCH
4108
                                                                       
tel: +41 21 693 03 23
CH - 1015 Lausanne e-
mail: geoffrey.wood.epfl.ch
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Received on Wed May 21 2008 - 06:07:22 PDT
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