The AMBERHOME is still my environment variable.
But, I am still unable to use the command.
----- Original Message -----
From: Alessandro Nascimento <al.s.nascimento.gmail.com>
Date: Wednesday, April 23, 2008 5:33 pm
Subject: Re: AMBER: Tutorial B5
To: amber.scripps.edu
Cc: chihying.usc.edu
> If you were able to do this before, you've most probably lost you
> environment variables.
> You can try:
>
> % echo $AMBERHOME
>
> in your shell. If it returns nothing, that's the reason. You can add
> AMBERHOME to your environment variables using
>
> % export AMBERHOME=/usr/local/amber9 (or anywhere you installed
> amber), if you're using bash
>
> In the manual you can see more details.
>
> HTH,
>
> --alessandro
>
>
>
> On Wed, Apr 23, 2008 at 5:13 PM, Chih-Ying Lin <chihying.usc.edu>
> wrote:>
> >
> >
> > Hi
> > I have been practicing the Amber tutorials B5.
> > And everything runs well with the following command.
> > $AMBERHOME/exe/ptraj prmtop < ptraj.in > ptraj.out
> >
> > http://amber.scripps.edu/tutorials/basic/tutorial5/index.html
> >
> >
> > But I tried to practice the Amber tutorials B5 again today.
> > the following command become useless.
> > $AMBERHOME/exe/ptraj prmtop < ptraj.in > ptraj.out
> >
> > I don't know what happened.
> > Should I re-install or re-compile the Amber system ?
> >
> > Thanks
> > Lin
> --------------------------------------------------------------------
> ---
> The AMBER Mail Reflector
> To post, send mail to amber.scripps.edu
> To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
>
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Sun Apr 27 2008 - 06:07:24 PDT
