From: Francesco Pietra <>
Date: Wed, 28 Nov 2007 23:26:45 -0800 (PST)

Is it any way to implement RAMD (Random Acceleration Molecular Dynamics, as
from D Case et al J Comput Chem 2005, 26, 1668-1688) in Amber9? I would like to
apply it to push a ligand out of a pore protein and see the path.


francesco pietra

Get easy, one-click access to your favorites.
Make Yahoo! your homepage.
The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Sun Dec 02 2007 - 06:07:16 PST
Custom Search