Re: AMBER: Pre-ABMER Installation Prob w/ MPICH2

From: jantonioms J. A. Mondragon S <jantonioms.gmail.com>
Date: Fri, 23 Nov 2007 11:36:12 -0600

you have permission to write in /usr/local/mpitch ... directory?

On Nov 22, 2007 1:55 PM, Joseph Maxwell <jemaxwell2.hotmail.com> wrote:
>
> Not quite a direct AMBER question but posting in order to expedite AMBER
> installation
>
> Attempting to install
> mpich2-1.0.6 as a prerequisite to amber installation on an Octane O/S 6.5.26
> Dual CPU
> Followed instruction set provided with package
> Instructions executed ==>
> tar xfz mpich2.tar.gz
> cd mpich2-1.0.6
>
> mkdir /usr/local/mpich2-install
> ./configure --prefix=/usr/local/mpich2-install |& tee c.txt
> <==
> Installation broke early at ./configure step
> Output from config summary ==>
> machine2 6% cat c.txt
> Configuring MPICH2 version 1.0.6 with '--prefix=/usr/local/mpich2-install'
> Running on system: IRIX64 machine2 6.5 01080747 IP30
> Executing mpich2prereq in /usr/local/mpich2-1.0.6p1/src/mpid/ch3 with
> Executing mpich2prereq in
> /usr/local/mpich2-1.0.6p1/src/mpid/ch3/channels/sock
> sourcing /usr/local/mpich2-1.0.6p1/src/pm/mpd/mpich2prereq
> sourcing /usr/local/mpich2-1.0.6p1/src/pm/mpd/setup_pm
> checking for gcc... gcc
> checking for C compiler default output file name... configure: error: C
> compiler cannot create executables
> See `config.log' for more details.
> machine2 7%
> machine2 7%
> <==
> Log file
> Could post whole file if needed, but I think these should suffice
> config.log (extracts)
> =====================
> $ ./configure --prefix=/usr/local/mpich2-install
> ## --------- ##
> ## Platform. ##
> ## --------- ##
> hostname = machine2
> uname -m = IP30
> uname -r = 6.5
> uname -s = IRIX64
> uname -v = 01080747
> /usr/bin/uname -p = mips
> /bin/uname -X = unknown
> /bin/arch = unknown
> /usr/bin/arch -k = unknown
> /usr/convex/getsysinfo = unknown
> hostinfo = unknown
> /bin/machine = unknown
> /usr/bin/oslevel = unknown
> /bin/universe = unknown
> ...
> ...
> ...
> ## ----------- ##
> ## Core tests. ##
> ## ----------- ##
> configure:3027: checking for gcc
> configure:3043: found /usr/freeware/bin/gcc
> configure:3053: result: gcc
> configure:3297: checking for C compiler version
> configure:3300: gcc --version </dev/null >&5
> gcc (GCC) 3.3
> Copyright (C) 2003 Free Software Foundation, Inc.
> This is free software; see the source for copying conditions. There is NO
> warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
> configure:3303: $? = 0
> configure:3305: gcc -v </dev/null >&5
> Reading specs from /usr/freeware/lib/gcc-lib/mips-sgi-irix6.5/3.3/specs
> Configured with: ../configure --prefix=/usr/freeware
> --enable-version-specific-runtime-libs --disable-shared --enable-threads
> --enable-haifa --enable-libgcj --disable-c-mbchar
> Thread model: single
> gcc version 3.3
> configure:3308: $? = 0
> configure:3310: gcc -V </dev/null >&5
> gcc: `-V' option must have argument
> configure:3313: $? = 1
> configure:3336: checking for C compiler default output file name
> configure:3339: gcc conftest.c >&5
> gcc: installation problem, cannot exec `as': No such file or directory
> configure:3342: $? = 1
> configure: failed program was:
> | /* confdefs.h. */
> |
> ...
> ...
> ...
> Hope someone might have a handle on what is going on here
>
> Thanks!
>
>
> ________________________________
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Received on Sun Nov 25 2007 - 06:07:39 PST
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