On Thu, Nov 08, 2007, Francesco Pietra wrote:
> In connection with problems with DOCK6.1 I wanted to check the Linux parallel
> installation of Amber9
>
> export DO_PARALLEL='mpirun -np 4'
> cd $AMBERHOME/test
> make test.parallel
>
> was OK
>
> Then, I had to repeat the test. This time distractedly I commanded "make clean"
> before "make test.parallel", which clean resulted in:
>
> (find antechamber -name '*.out' -o -name '*.log' -o - name '*.lib' -o\ -name
> "*.dif" |\
> while read dif ;\
> do \
> rm -f $dif ;\
> done ;\
> cd leap; rm -f *.out *.log *.dif *.lib
> while read dif ;\
> do \
> rm -f $dif ;\
> done ;\
> rm -f TEST_FAILURES.diff
> ----------
> All tests PASSED according to screen observation, and top -i showed sander
> working on all four nodes, though now there are no more files to check. Is it
> possible to restore the original situation?
It's not clear to me what the problem is. Can you define what you mean by
"the original situation"? Typing "make clean" will indeed remove many dif
files from previous tests, but you say that you subsequently did "make
test.parallel" and everything PASSED.
...dac
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Received on Sun Nov 11 2007 - 06:07:30 PST
