Re: AMBER: for makeDIST_RST

From: David A. Case <>
Date: Fri, 14 Sep 2007 08:10:28 -0700

On Wed, Sep 12, 2007, Wenyong Tong wrote:
> Then type: makeDIST_RST -vol 7col.dist -pdb
> but there are no id20, oscale, taumet , taurot and
> emix at the top of the file as sample provide in the
> Amber manual.

You have to manually edit the output from makeDIST_RST to add these values.

> If I give the imix=0.2 (mixing time is 200ms)
> makeDIST_RST -imix 0.2 -vol 7col.dist -pdb gcg_b.amb.pdb -svf NOE

The "imix" command-line variable is an integer (stating which mixing time is
used, not its value.)

...good luck...dac

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Received on Sun Sep 16 2007 - 06:07:36 PDT
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