Thanks. In the meantime I had similarly started another similar job and a
second processor, at my pleasure, was being used. "top -i" shows all details,
sander.MPI, sander.MPi, mpirun, orted, top, atieventsd. Perhaps because of the
modest size of the run and huge RAM available, running was not slowed down.
Thanks also for the ref to multisander. I forgot about that. I'll look at.
francesco pietra
--- Carlos Simmerling <carlos.simmerling.gmail.com> wrote:
> yes it is possible- just start them up and the system takes
> care of it. running more jobs than processors can slow things
> down, but otherwise this is straightforward.
>
> On 9/4/07, Francesco Pietra <chiendarret.yahoo.com> wrote:
> >
> > I am running qmmm in vacuum on a single residue. Instead of launching
> > seril
> > sander, I just did
> >
> > mpirun -np 1 $AMBERHOME/exe/sander.MPI .....
> >
> > I would like to run several other similar processes. Is it possible on
> > different processors, i.e., each run on a different processor going on
> > simultaneously? I was unable to find the solution of the archive.
> >
> > Thanks
> >
> > francesco pietra
> >
> >
> >
> >
> >
>
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Received on Wed Sep 05 2007 - 06:07:35 PDT
