When running the "distance" command in ptraj, I saw:
-------------------------------------------------------------------------------------------------------
Processing AMBER trajectory file ../prod.mdcrd
DISTANCE: box angles are zero, disabling imaging!
-------------------------------------------------------------------------------------------------------
and I got a distance much larger than I expected between two residues
(because imaging was not used). But in my inpcrd files I provided box
information (box angles are all 90.0 degrees). In ptraj, I used the command
box to reset the box properties, but I got the same. Anything missing?
[]s,
Roberto
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed Jun 06 2007 - 06:07:18 PDT
