Hi Amber experts,
I downloaded Antechamber Version 1.27 from the Amber website. It looks like
divcon is missing from this version... When I try Ross Walker's tutorial
with sustiva, ie. I type the command,
$AMBERHOME/exe/antechamber -i sustiva.pdb -fi pdb -o sustiva.prepin -fo
prepi -c bcc -s 2
I get this output:
====================
Running: /w1/antech127/exe/bondtype -i ANTECHAMBER_BOND_TYPE.AC0 -o
ANTECHAMBER_BOND_TYPE.AC -f ac -j full
Running: /w1/antech127/exe/atomtype -i ANTECHAMBER_AC.AC0 -o
ANTECHAMBER_AC.AC -p gaff
Total number of electrons: 160; net charge: 0
Running: $AMBERHOME/exe/divcon
sh: /w1/antech127/exe/divcon: No such file or directory
Error: cannot run "$AMBERHOME/exe/divcon" of bcc() in charge.c properly,
exit
====================
Please let me know what the issue is here...
Thanks,
Neelanjana Sengupta
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Received on Wed May 30 2007 - 06:07:24 PDT
