AMBER: (no subject)

From: Catein Catherine <>
Date: Wed, 23 May 2007 13:00:36 +0800

Dear Sir/Madam,

I tried to do the MM/GBSA for a protein/complex, but the following error
message happen all the times:

                /workstation/nmode -O -i -o nmode_com.1.out -c
sanmin_com.1.restrt -p ../complex3.prmtop not
running properly_nm.log" 50L, 1175C

And the log file stop at the following step:

>>>Calculating energy / entropy contributions
    Calc contrib for ./1K4T_CPT1_md6to17_com.crd.1
        Calc MM/GB/SAS

Could you mind to teach me the meaning of these message? and how can I solve

Best regards,


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Received on Wed May 23 2007 - 06:07:47 PDT
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