RE: AMBER: REF file problem

From: Ross Walker <>
Date: Mon, 7 May 2007 08:13:58 -0700

Dear Deepti,
> restraintmask=1-20
This is the wrong format. If you want residues 1 to 20 then this should be:
if you want atoms 1 to 20 then:
Good luck...
|\oss Walker

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From: [] On Behalf Of
deepti nayar
Sent: Sunday, May 06, 2007 23:50
Subject: AMBER: REF file problem

hi all

thank you so much gustavo for your reply .As per your guidance, i changed my
input script and thus got it working. But now I am encountering one more
problem. the ref file that i am inputting into gives the following error. I
searched the amber archive for this and found out that initial coordinate
 doesnt serves as ref file all the time.

can u please tell me now where to get that ref file from to make my script
run.I am attaching my input file and output file.

any help is welcome
with regards

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Received on Wed May 09 2007 - 06:07:16 PDT
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