AMBER: Tutorial 3: MM-PBSA.....implicit solvent for MD calculations?

From: Catein Catherine <>
Date: Fri, 04 May 2007 16:13:44 +0800

Dear Sir/Madam,

I am trying to calculate the Gibbs free energy follow tutorial three:

I noted explicit solvent approach was used to get the MDCRD for PBSA
analysis. I could like to ask if it is possible to use implicit solvent
approach instead to do the molecular dynamics calculations and get the mdcrd
files for further analysis instead?

Best regards,


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Received on Sun May 06 2007 - 06:07:26 PDT
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