On Mon, Apr 30, 2007, Hayden Eastwood wrote:
>
> My output contains no reference to the numerous ARG residues that exist in
> the protein sequence - is this because ARG is not supported as a residue
> within the constph algorithm?
That is correct: see the package CPinData section of CPin.pm (in your
executable directory). The needed charge changes (on going from protonated to
neutral ARG) would need to be added there.
...regards...dac
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Sun May 06 2007 - 06:07:20 PDT
