I have successfully compiled PMEMD for Blue Gene. The problem was
apparently related to the version of the compilers that I had installed.
I had version 08.00.0000.0000 of XL C/C++ and 10.01.0000.0002 of XL
Fortran.
IBM asked me to update to 08.00.0000.0002 of C/C++ and 10.01.0000.0002
of Fortran, I did so and PMEMD compiled without any errors.
Now I just need get an Amber user here to test it :-)
Thanks for the help,
Mike
-----Original Message-----
From: owner-amber.scripps.edu [mailto:owner-amber.scripps.edu] On Behalf
Of David A. Case
Sent: Thursday, April 19, 2007 16:31
To: amber.scripps.edu
Subject: Re: AMBER: Blue Gene, compile Amber9?
On Thu, Apr 19, 2007, Mike Hanby wrote:
> I got the following response from IBM:
> Please add
> -Wl,--trace-symbol=__ctype_b
> to the link command
>
> Given that I'm not a programmer, I'm not exactly where this should go.
> Do I add this to one of the FLAG variables in the config.h file?
Add the above to the LOADFLAGS line in config.h (for pmemd).
...good luck....dac
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Received on Sun Apr 22 2007 - 06:07:46 PDT
