Re: AMBER: membrane simulation

From: nag raj <nagaraju_chem.yahoo.co.in>
Date: Sun, 15 Apr 2007 22:29:32 -0700 (PDT)

Dear Amber users,
                               
                              May I use GAFF force field for DOPC lipid bilayer. Any suggestion regarding DOPC lipid parametrs is appriciated.
                                   Thank you in advance,
                                                                               Nagaraja Mulpuri.

Jojart Balazs <jojartb.pharm.u-szeged.hu> wrote:
  Dear Amber users,

we've tested the GAFF performance in fully hidrated lipid bilayer simulations. As David A. Case suggested, we would like to share our experinece.
The article is available:
http://www3.interscience.wiley.com/cgi-bin/abstract/114209721/ABSTRACT.
We hope that out results help to everybody, who would like to simulate membrane bilayers.

Balazs Jojart & Tamas A. Martinek
Unversity of Szeged

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Received on Wed Apr 18 2007 - 06:07:13 PDT
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