AMBER: getting same box dimension

From: bertrand russell <>
Date: Mon, 26 Feb 2007 10:57:40 +0530

Dear Amber users,

I am trying to run a simulation with a system which already has been
equilibrated. In order to alter coordinates of a particular atom I created a
.pdb file and altered the coordinates. Previously I equilibrated and ran a
production run of around 5ns. Now I want to run leap to generate new .crd
and .top files for the coordinate altered system to continue my run. How can
I get the same box dimension of my previous run? Many thanks in advance.
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Received on Wed Feb 28 2007 - 06:07:15 PST
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