AMBER: Errors in amber9 parallel installation

From: Seongeun Yang <seongeun.korea.ac.kr>
Date: Thu, 22 Feb 2007 22:34:23 +0900

Hello all,

After the 'make serial' process was completed successfully,
I got error messages while trying to build a parallel version of amber9 on Intel Xeon cluster.

The later part of the error messages looks like this.

.....
force.o(.text+0x2dd2): more undefined references to `mpi_bcast_' follow
force.o(.text+0x4b36): In function `force_.A':
: undefined reference to `mpi_allgather_'
force.o(.text+0x4b6f): In function `force_.A':
: undefined reference to `mpi_allgather_'
force.o(.text+0x5adc): In function `force_.A':
: undefined reference to `mpi_bcast_'
force.o(.text+0x5b22): In function `force_.A':
: undefined reference to `mpi_bcast_'
force.o(.text+0x5b4a): In function `force_.A':
: undefined reference to `mpi_bcast_'
force.o(.text+0x5b71): In function `force_.A':
: undefined reference to `mpi_bcast_'
force.o(.text+0x5bb4): In function `force_.A':
: undefined reference to `mpi_bcast_'
force.o(.text+0x5bdc): more undefined references to `mpi_bcast_' follow
make[1]: *** [sander.MPI] Error 1
make[1]: Leaving directory /usr/local/amber9/src/sander'
make: *** [parallel] Error 2
.....

Please let me know how to solve the problem.

Thanks.

Seongeun
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Received on Sun Feb 25 2007 - 06:07:18 PST
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