AMBER: ab initio modeling using Amber

From: snoze pa <>
Date: Thu, 1 Feb 2007 20:59:17 -0600

Dear Amber Users,
 Is it possible to use amber for ab initio calculations. I want to model a
small protein for which no PDB template available
so I want to use ab initio technique. If yes, is there any tutorials
available in AMBER. There is a paper published in Proteins,
2003 "Ab initio construction of polypeptide fragments: Accuracy of loop
decoy discrimination by an all-atom statistical
potential and the AMBER force field with the Generalized Born solvation
model by *de Bakker
,*DePristo MA*<>
,*Burke DF*<>
*Blundell TL*<>
.Proteins. <javascript:AL_get(this, 'jour', 'Proteins.');> 2003 Apr
thank you

The AMBER Mail Reflector
To post, send mail to
To unsubscribe, send "unsubscribe amber" to
Received on Sun Feb 04 2007 - 06:07:44 PST
Custom Search