AMBER: solvation of protein using TIP3PBOX in amber 8

From: Syed Tarique Moin <>
Date: Sat, 13 Jan 2007 10:25:46 -0800 (PST)

  Plz guide me as, during solvation my protein is not fully enclosed in a solvent, i.e protein is found to be away from solvent and solvent is found at one end or half covered the protein.
  I want assistance in this regard.
  Thanks in advance

Syed Tarique Moin,
Junior Research Fellow,
H.E.J. Research Institute of Chemistry,
International Center for Chemical and Biological Sciences,
University of Karachi, Karachi-75720, Pakistan
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Received on Sun Jan 14 2007 - 06:08:06 PST
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