AMBER: How to specify a box with few walls rigid and others with periodic boundary conditions and then apply a pressure gradient across it?

From: Gobind Singh Bisht <gsbisht1.gmail.com>
Date: Thu, 30 Nov 2006 13:04:28 +0530

dear users,
                How to define a rectangular box with two sides having a
periodic boundary condition and the rest with a rigid boundary condition?
Also how to apply a pressure gradient across a box ? Is there any command in
amber which could achieve this?
Please suggest some way to achieve this. Its very important.
thanx a lot
regards 

-- 
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Gobind Singh Bisht
Department Of Biotechnology
IIT Kharagpur, Kharagpur-721302
West Bengal, India
Ph No: +919932604909
Website: http://users.cjb.net/gobindbisht/
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Received on Sun Dec 03 2006 - 06:07:22 PST
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