'impose' command of Leap will change the bond/angle/dihedral angles. Check
out the manual. If your structure is a helical structure, though, impose
command will not work. I had such an experience; needed to creat 360
structures by changing one particular dihedral angle by 1 degrees each
time, but because the structure was helical, it didnt work. I solved
it at the end. Your case is linear, so should not be a problem.
Best,
On Wed, 13 Sep 2006, priya priya wrote:
> Dear
>
> I have loaded a linear sequence of 15 residue peptide....now i want to change the dihedral angles and want to start with the different conformation.
> Please suggest me the path for that.
>
> With Regards
> Priya
>
>
> ---------------------------------
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--
Ilyas Yildirim
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Received on Sun Sep 17 2006 - 06:07:06 PDT
