AMBER: Building an RNA - Proflavin Complex

From: <>
Date: Mon, 24 Jul 2006 16:05:49 -0400

Dear Amber Community,

        I am trying to intercalate an RNA sequence with proflavin. I read the paper
that where DNA was intercalated with ethidium but I would like some suggestion
as to the "easiest" way to build the initial starting structure. For now I am
beginning to use InsightII on an SGI machine, but before I venture too far I
would be greatful for any suggestions.

Seth Lilavivat
Georgia Institute of Technology

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Received on Wed Jul 26 2006 - 06:07:08 PDT
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