Re: AMBER: script to extract data from minimization .out file

From: <sangeeta.bioinfo.ernet.in>
Date: Sat, 8 Jul 2006 10:23:52 +0000 (UTC)

Hi Tanya,
You may also use the perl script "process_mdout.perl", available with
Amber. For details, have a look at the Amber Workshop Tutorial 2 Section
3.
Best wishes,
Sangeeta Sawant
Bioinformatics Centre
University of Pune
India

 On Fri, 7 Jul 2006, Tanya Johannsen wrote:

> Dear AMBER community:
>
> Does anyone have a script that can extract information
> (such as ENERGY) from a minimization .out file and put
> it in a data file that can be easily plotted? If
> anyone has such a script, I would be very grateful if
> I could borrow it. I looked at the listserv archive
> and tried the "plotamber" program that was suggested,
> but it doesn't seem to work on AMBER 8.
>
> Thank you very much in advance for any suggestions.
>
> Tanya
>
>
> __________________________________________________
> Do You Yahoo!?
> Tired of spam? Yahoo! Mail has the best spam protection around
> http://mail.yahoo.com
> -----------------------------------------------------------------------
> The AMBER Mail Reflector
> To post, send mail to amber.scripps.edu
> To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
>

-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Sun Jul 09 2006 - 06:07:25 PDT
Custom Search