AMBER: 2-D free energy surface using WHAM

From: Atsutoshi Okabe <okabe.cherry.bio.titech.ac.jp>
Date: Mon, 3 Jul 2006 21:08:01 +0900

Dear all,

 

I want to calculate two-dimensional free energy surface along reaction
coordinate( distances, r and d )

using umbrella sampling and WHAM method .

I could calculate one-dimentional case using these methods, but I don't know
how to make

Input file on two-dimentional case.

Could you please tell me how to make the input file ?

 

Thank you.

 

Atsutoshi

 

 


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Received on Wed Jul 05 2006 - 06:07:11 PDT
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