AMBER: xleap on iMac G5

From: Evan Kelly <>
Date: Fri, 5 May 2006 22:01:53 -0600

Hi Everyone,

I recently installed Amber 9 on my iMac G5 using an Absoft compiler.
Everything worked, except for xleap. I am using the standard X11
program distributed by Apple. I try a make command in the src/leap
directory, and end up with the following error:

gcc -o xaLeap basics.o sysdepend.o stringExtra.o varArray.o
getline.o avl.o pdb_format.o pdb_read.o pdb_sprntf.o pdb_sscanf.o
pdb_write.o vector.o zMatrix.o sort.o bag.o hash.o dictionary.o
database.o nVector.o ring.o matrix.o fortran.o displayer.o assoc.o
atom.o byteArray.o collection.o container.o internal.o list.o loop.o
molecule.o oDouble.o oInteger.o oString.o objekt.o parmSet.o
residue.o unit.o unitio.o tripos.o graphUtil.o select.o amber.o
build.o elements.o library.o chirality.o minimizer.o model.o
parmLib.o pdbFile.o tools.o variables.o parser.o help.o helptext.o
octree.o commands.o mathop.o block.o restraint.o hybrid.o xTank.o
xAction.o x3d.o xBasics.o xaLeapc.o xaUnitEditor.o xaTable.o
xaAtomTable.o XrawRegistr.o xaCommand.o xaTools.o xaAtomParmTable.o
xaBondParmTable.o xaAngleParmTable.o xaParmEditor.o
xaTorsionParmTable.o xaImproperParmTable.o xaHBondParmTable.o ../
Xraw/libXaw.a ../Wc/libWcLeap.a ../Xpm/libXpm.a ../Xmu/libXmu.a -L /
usr/X11R6/lib -lXt -lXext -lSM -lICE -lX11 -lm -lpthread
/usr/bin/ld: -L: directory name missing

where I have included the command that seems to cause it right
above. Has anybody successfully installed xleap on OS X (10.4)? Can
anyone make a suggestion about my problem?


Evan Kelly

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Received on Sun May 07 2006 - 06:07:08 PDT
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