Hi,
I think I have successfully compiled Amber7 sander with Mpich 1.2.7.
However I am still getting this error (run out of web/google options how
to fix this now):
[dohnalek.m2 6cpus_mpich]$ mpirun -np 6 sander -O -i mdin -o mdout -p
prmtop -c prmcrd -x mdcrd -v mdvel -e mden -inf mdinfo &
[1] 25998
[dohnalek.m2 6cpus_mpich]$ Warning: Command line arguments for program
should be given
after the program name. Assuming that -O is a
command line argument for the program.
Warning: Command line arguments for program should be given
after the program name. Assuming that -i is a
command line argument for the program.
Unrecognized argument sander ignored.
/home/dohnalek/amber/md_penta/6cpus_mpich/mdin: line 1: syntax error
near unexpected token `&'
/home/dohnalek/amber/md_penta/6cpus_mpich/mdin: line 1: `&cntrl'
[1] Exit 2 mpirun -np 6 sander -O -i mdin -o
mdout -p prmtop -c prmcrd -x mdcrd -v mdvel ...
[dohnalek.m2 6cpus_mpich]$
Please, please. Anyone familiar with this problem?
Jan
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Received on Wed Jan 11 2006 - 06:10:05 PST
