AMBER: How to use PTRAJ to analyze the CA RMS diveations as a function of residue number?

From: tonglei <xbcdnana.gmail.com>
Date: Mon, 9 Jan 2006 10:36:30 +0800

Hi:

 I want to identify the parts of the protein that underwent large
conformational changes.

How to use PTRAJ to analyze the CA RMS diveations as a function of residue
number? How to prepare the input files?

 Thanks in advance

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Received on Wed Jan 11 2006 - 06:10:04 PST