Quoting "Alec M. Resnick" <aresnick.mit.edu>:
> So I figured that if anyone could provide an elegant software
> solution to this problem, AMBER users could. I've been searching for
> a simple program which can be used to create stylized, 3D ball and
> stick models from a set of coordinates (not too large at all).
> Additionally, I'd like to draw in the dipole vector. A high degree
> of customization would be ideal. What options might I have from
> which to choose?
You might also consider Jmol (
http://jmol.sourceforge.net/) which visualizes
structures using Java (JRE
http://java.sun.com/j2se/1.5.0/download.jsp) in
browsers such as IE, firefox etc...
It has a quite nice scripting system to automate things.
We use it to display 3D structures but also atomic charges in web pages...
See an example
http://www.u-picardie.fr/labo/lbpd/RED/
Regards, Francois
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Tue Oct 18 2005 - 20:53:01 PDT
