AMBER: Bromelain PDF xleap load error

From: Thomas Patko <>
Date: Wed, 04 May 2005 10:13:35 -0700

AMBER Users:

I am trying to load the very small protein bromelain to do
some MD simulations. There seems to be a problem with the
connectivity between each residue when I load it in xleap.
Am I doing something wrong here or is there a problem with
the initial PDB file? The protein of interest is attached
to this e-mail as is my output from xleap (leap.log) when
I try to load the protein in xleap.


Thomas Patko

Graduate Student
Department of Chemistry & Biochemistry
California State University, Long Beach
Dr. Marco Lopez Research Group

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Received on Wed May 04 2005 - 18:53:00 PDT
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