John Silvio Vieceli wrote:
>Hi,
>
>Are intramolecular nonbonded interactions applied to atoms separated by
>more than three bonds in the AMBER force field? I understand that 1,4
>LJ and Coulomb interactions are calculated and scaled by 1/2 and 1/1.2,
>respectively. But what about 1,5 and beyond? Are these interactions
>included
>
yes
>and, if so, scaled by any factor?
>
no
>Thank you.
>
>
>
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed Apr 20 2005 - 23:53:01 PDT