Re: AMBER: intramolecular nonbonded interactions in AMBER force field

From: Carlos Simmerling <carlos.ilion.bio.sunysb.edu>
Date: Wed, 20 Apr 2005 18:28:08 -0400

John Silvio Vieceli wrote:

>Hi,
>
>Are intramolecular nonbonded interactions applied to atoms separated by
>more than three bonds in the AMBER force field? I understand that 1,4
>LJ and Coulomb interactions are calculated and scaled by 1/2 and 1/1.2,
>respectively. But what about 1,5 and beyond? Are these interactions
>included
>
yes

>and, if so, scaled by any factor?
>
no

>Thank you.
>
>
>


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Received on Wed Apr 20 2005 - 23:53:01 PDT
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