Dear All,
I have a quick question, which I could not find an answer in the amber
mailing list. I want to compile just sander. I am doing the following:
I copy the sander directory to my home directory as follows;
# cp -R $AMBERHOME/src/sander ~/sander
Then, I try to compile sander as follows:
# cd ~/sander
# make sander
Everything looks to be fine, but at the end I am getting the following
error:
..
..
..
ifort -c -w95 -tpp7 -mp1 -O0 -FR -o prn_dipoles.o _prn_dipoles.f
cd ../lib; make sys.a
/bin/sh: line 1: cd: ../lib: No such file or directory
make[1]: Entering directory `/home/yildirim/deneme/sander'
make[1]: *** No rule to make target `sys.a'. Stop.
make[1]: Leaving directory `/home/yildirim/deneme/sander'
make: *** [syslib] Error 2
Then, I have copied all of the original $AMBERHOME directory to my home
directory ~/amber8 and deleted all the files in $AMBERHOME/exe directory.
Then I am doing the following:
# make clean
while I was in $AMBERHOME/src directory. Then, when I did the following
# cd $AMBERHOME/src/sander
# setenv AMBERHOME ~/amber8
# make sander
it compiled the sander.
My question is as follows: Do I have to copy all of the amber8 files into
one directory, and then compile just the programs I want, like sander? Or
is there another way to just compile sander (or even leap, etc.)? Thanks
in advance.
Best,
--
Ilyas Yildirim
---------------------------------------------------------------
- Department of Chemisty - -
- University of Rochester - -
- Hutchison Hall, # B10 - -
- Rochester, NY 14627-0216 - Ph.:(585) 275 67 66 (Office) -
- http://www.pas.rochester.edu/~yildirim/ -
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Received on Fri Mar 11 2005 - 03:53:01 PST
