This subject should be addressed in the manual for your mpi installation.
Some systems require standard input to be redirected from /dev/null/. This
is true on Altix and probably other SGI's.
E.g.
mpirun -np 4 $AMBERHOME/exe/sander -O -i mdin -o mdout -p prmtop -c inpcrd
</dev/null
All the best
Ross
/\
\/
|\oss Walker
| Department of Molecular Biology TPC15 |
| The Scripps Research Institute |
| Tel:- +1 858 784 8889 | EMail:- ross.rosswalker.co.uk |
|
http://www.rosswalker.co.uk/ | PGP Key available on request |
Note: Electronic Mail is not secure, has no guarantee of delivery, may not
be read every day, and should not be used for urgent or sensitive issues.
> -----Original Message-----
> From: owner-amber.scripps.edu
> [mailto:owner-amber.scripps.edu] On Behalf Of ygao.phase1.unl.edu
> Sent: 20 January 2005 15:40
> To: amber.scripps.edu
> Subject: AMBER: Suspended (tty input)
>
> Hi,
>
> I'm now running md and sometimes encounter " Suspended (tty input)"
> errors, but sometimes it's okay. Would you kindly help me?
>
> Yi
>
> __________________________________________________________
>
> Department of Chemistry
> University of Nebraska -- Lincoln
> Lincoln, NE, USA 68508
>
> Phone: 1-402-472-9982 (O)
> 1-402-310-4155 (M)
> Email: ygao.phase1.unl.edu
>
> __________________________________________________________
> --------------------------------------------------------------
> ---------
> The AMBER Mail Reflector
> To post, send mail to amber.scripps.edu
> To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
>
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Fri Jan 21 2005 - 00:53:00 PST
