Dear AMBER users
I calcaulted RMS fluctuations along the first and the
second modes obtained from PCA by the following
commands:
analyze modes fluct file evec.pev beg 1 end 1 out
rms11
analyze modes fluct file evec.pev beg 2 end 2 out
rms22
May somebody explain me the exact formule by which
these fluctuations are calculated?
The fluctuations along the second mode are greater. I
want to be sure that I have not made any mistakes. I
would appreciate if someone helps me.
Best regards,
M. Moghaddam
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Received on Mon Jan 17 2005 - 14:52:59 PST