Re: AMBER: build a cyclic peptide

From: Bill Ross <ross.cgl.ucsf.edu>
Date: Tue, 23 Nov 2004 18:33:04 -0800 (PST)

> I wonder if there is a way to build a cyclic
> peptide in leap. "sequence" seems to give a linear one

Make a linear one and close the terminii. You can use xleap's
minimization function and clean up overlaps manually.

Bill
-----------------------------------------------------------------------
The AMBER Mail Reflector
To post, send mail to amber.scripps.edu
To unsubscribe, send "unsubscribe amber" to majordomo.scripps.edu
Received on Wed Nov 24 2004 - 02:53:00 PST
Custom Search